Starter Unit

Starter Unit

Good Morning all,
 Just wondering if someone can point me in the right direction. I'm green to MV  (10) weeks now.
 I created a tall starter product with 2 bays, roll outs on the bottom and 2 adj. shelves up top
With (1) tall door on a 6" base platform (from our components). The reds came back with a request to lower the base to 4" yet maintain the height.   Easy enough right?  Well first I had a heck of a time getting the Case and the door to align and now the hinge placement is out of wack.  
   I'm attaching the original elevation of the model and the result of my attempt. 
I had to move the door down after I resized the case in the sub assembly prompts. But after that move the hinges and the handle are not right. I am guessing at this moment it has to do with the origin of the part.

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